Commits · 497d35c26f3c94066f0c3a70d4b6769364f7371b · Sean Solari / exPAM

11 May, 2022 2 commits
- Added --version flag · 497d35c2
  Sean Solari authored May 11, 2022
  
  497d35c2
- Added quickstart tutorial. Revamp docs. · e95d62ee
  Sean Solari authored May 11, 2022
  
  e95d62ee
07 May, 2022 1 commit
- Bug Fixes · 2a4d8168
  Sean Solari authored May 07, 2022
  
  2a4d8168
02 May, 2022 1 commit
- Updated setup.py with extras_require · 9bc1f0c5
  Sean Solari authored May 02, 2022
  
  9bc1f0c5
01 May, 2022 2 commits
- Bug fix for converting incompatible taxids in results · 12054b70
  Sean Solari authored May 01, 2022
  
  12054b70
- Script for making taxids compatible with local ete3 taxonomy database · 367a3d70
  Sean Solari authored May 01, 2022
  
  367a3d70
26 Apr, 2022 7 commits
- Type hints fixed · 0c624549
  Sean Solari authored Apr 26, 2022
  
  0c624549
- Type hinting fixes · f2791670
  Sean Solari authored Apr 26, 2022
  
  f2791670
- Include pyx files · 4f005cc6
  Sean Solari authored Apr 26, 2022
  
  4f005cc6
- Ignore pycache · 9ceb8764
  Sean Solari authored Apr 26, 2022
  
  9ceb8764
- Bug fixes for new factoring · 74bc8cd3
  Sean Solari authored Apr 26, 2022
  
  74bc8cd3
- Bug fixes · 0e01e20b
  Sean Solari authored Apr 26, 2022
  
  0e01e20b
- Bug fixes for tree and database building · d15820b7
  Sean Solari authored Apr 26, 2022
  
  d15820b7
25 Apr, 2022 3 commits
- Bug fixes for database creation · d1d4c5da
  Sean Solari authored Apr 25, 2022
  
  d1d4c5da
- Bug fixes for cython compilation · e0779df2
  Sean Solari authored Apr 25, 2022
  
  e0779df2
- Refactored codes into isolated modules · 20df4ab3
  Sean Solari authored Apr 25, 2022
  
  20df4ab3
07 Apr, 2022 2 commits
- Bug fixes in sandbox code · 165c87f7
  Sean Solari authored Apr 07, 2022
  
  165c87f7
- refreshed expam_limit interface · a77bf432
  Sean Solari authored Apr 07, 2022
  
  a77bf432
22 Mar, 2022 1 commit
- Update to documentation, --itol flag and log scaling of results · 1a259417
  Sean Solari authored Mar 22, 2022
  
  1a259417
18 Mar, 2022 2 commits
- Bug fixes · a79f4124
  Sean Solari authored Mar 18, 2022
  
  a79f4124
- ITOL compatibility · 0328eb3d
  Sean Solari authored Mar 18, 2022
  
  0328eb3d
17 Mar, 2022 1 commit
- Fixed shell command for making public · ed154aca
  Sean Solari authored Mar 17, 2022
  
  ed154aca
14 Mar, 2022 1 commit
- Grouping specification changes. Added log scale option · 0b66ec7a
  Sean Solari authored Mar 14, 2022
  
  0b66ec7a
04 Mar, 2022 8 commits
- Public version 0.0.8 · 2a61fae2
  Sean Solari authored Mar 04, 2022
  
  2a61fae2
- Colour clades based on raw node counts, not cumulative node counts. · bca2a083
  Sean Solari authored Mar 04, 2022
  
  bca2a083
- Specify directory of results · 1628cc14
  Sean Solari authored Mar 04, 2022
  
  1628cc14
- Allow multiple invocations of -d flag · 955e98bb
  Sean Solari authored Mar 04, 2022
  
  955e98bb
- Pushing files · 1481008f
  Sean Solari authored Mar 04, 2022
  
  1481008f
- Publication version 0.0.8 · 99b33908
  Sean Solari authored Mar 04, 2022
  
  99b33908
- README · c32acf88
  Sean Solari authored Mar 04, 2022
  
  c32acf88
- Updated documentation · d1b7608b
  Sean Solari authored Mar 04, 2022
  
  d1b7608b
17 Jan, 2022 1 commit
- Programmatic plotting interface to tree · 625063db
  Sean Solari authored Jan 17, 2022
  
  625063db
14 Jan, 2022 1 commit
- Updates to tree drawing interface · 9522d752
  Sean Solari authored Jan 14, 2022
  
  9522d752
19 Dec, 2021 1 commit
- Classification implementation bug fix · 5dc49bb4
  Sean Solari authored Dec 19, 2021
  
  5dc49bb4
10 Dec, 2021 1 commit
- Sandbox interface · 5fc958a0
  Sean Solari authored Dec 10, 2021
  
  5fc958a0
09 Dec, 2021 1 commit
- Sandbox mode · d89efeee
  Sean Solari authored Dec 09, 2021
  
  d89efeee
30 Nov, 2021 1 commit
- Bug fixes. Classification routines finalised and tested · 1c5fde19
  Sean Solari authored Nov 30, 2021
  
  1c5fde19
29 Nov, 2021 3 commits
- Bug fixes for classification routine · 0a7f1f46
  Sean Solari authored Nov 29, 2021
  
  0a7f1f46
- Changes to classification algorithm execution · 8d0c410c
  Sean Solari authored Nov 29, 2021
  
  8d0c410c
- Changes to classification algorithm draft · 70e65089
  Sean Solari authored Nov 29, 2021
  
  70e65089