rm output_dir

smoke_test/output_dir/picard/2.9.2

-

smoke_test/output_dir/python/3.6.6-gcc5

-
-Python 3.6.6
-pip 18.0 from /usr/local/python/3.6.6-gcc5/lib/python3.6/site-packages/pip (python 3.6)

smoke_test/output_dir/python/3.7.3-system

-
-Python 2.7.5
-pip 19.2.3 from /usr/local/python/3.7.3-system/lib/python3.7/site-packages/pip (python 3.7)

smoke_test/output_dir/samtools/1.7

-
-samtools 1.7
-Using htslib 1.7
-Copyright (C) 2018 Genome Research Ltd.

smoke_test/output_dir/samtools/1.9

-
-samtools 1.9-24-gff68e70
-Using htslib 1.9-20-ge1650a9
-Copyright (C) 2018 Genome Research Ltd.

smoke_test/output_dir/samtools/1.9-gcc5

-
-samtools 1.9-24-gff68e70
-Using htslib 1.9-20-ge1650a9
-Copyright (C) 2018 Genome Research Ltd.

smoke_test/output_dir/singularity/3.2.1

-
-singularity version 3.2.1

smoke_test/output_dir/tigervnc/1.8.0

-

smoke_test/output_dir/virtualgl/2.5.0

-
-
-Usage: vglrun [options] [--] <OpenGL app> [OpenGL app arguments]
-
-VirtualGL options (see documentation for a more comprehensive list)
-
--c <c>    : proxy = Send 3D images uncompressed using X11 Transport
-                    [default for local X connections]
-            jpeg = Compress 3D images using JPEG/send using VGL Transport
-                   [default for remote X connections]
-            rgb = Encode 3D images as RGB/send using VGL Transport
-            xv = Encode 3D images as YUV420P/send using XV Transport
-            yuv = Encode 3D images as YUV420P/send using the VGL Transport
-                  and display on the client using X Video
-            [If an image transport plugin is being used, then <c> can be any
-             number >= 0 (default=0).]
-
--nodl     : Don't interpose the dlopen() function.  dlopen() is normally
-            interposed to force applications that use dlopen() to load libGL
-            to load VirtualGL instead.  For the more common case of
-            applications that link directly with libGL, disabling the dlopen()
-            interposer makes VirtualGL less intrusive, since it will no longer
-            load libGL until the application actually uses that library.
-
--d <d>    : <d> = the X Display to use for 3D rendering [default = :0.0]
-
--fps <f>  : Limit client/server frame rate to <f> frames/sec
-
--gamma <g>: Set gamma correction factor to <g> (see docs)
-
--ge       : Fool application into thinking that LD_PRELOAD is unset
-
--ms <s>   : Force VirtualGL to use OpenGL multisampling with <s>
-            samples (<s> = 0 forces multisampling to be disabled)
-
--np <n>   : Use <n> CPUs to perform image compression [default = 1]
-
-+/-pr     : Enable/disable performance profiling output [default = disabled]
-
--q <q>    : Compression quality [1 <= <q> <= 100]
-            [default = 95 for JPEG/VGL Transport.  Has no effect with
-             X11 Transport]
-
--samp <s> : Chrominance subsampling factor
-            <s> = gray, 1x, 2x, 4x
-            [default = 1x for JPEG/VGL Transport.  Has no effect with
-             X11 Transport or RGB encoding]
-
-+/-s      : Enable/disable SSL encryption of VGL Transport or custom
-            image transport, if applicable.
-            [default = disabled.  Has no effect on the VGL Transport unless
-             VirtualGL was built with OpenSSL support]
-
-+/-sp     : Turn on/off frame spoiling [default = enabled]
-
--st <s>   : left = Send only left eye buffer of stereo application
-            right = Send only right eye buffer of stereo application
-            quad = Use quad-buffered stereo if available, otherwise use
-                   red/cyan (anaglyphic) stereo [default]
-            rc = Always use red/cyan (anaglyphic) stereo
-            gm = Always use green/magenta (anaglyphic) stereo
-            by = Always use blue/yellow (anaglyphic) stereo
-            i = Always use interleaved (passive) stereo
-            tb = Always use top/bottom (passive) stereo
-            ss = Always use side-by-side (passive) stereo
-
-+/-sync   : Enable/disable strict 2D/3D synchronization [default = disabled]
-
-+/-tr     : Enable/disable function call tracing (generates a lot of output)
-            [default = disabled]
-
--trans <t>: Use transport plugin contained in library libvgltrans_<t>.so
-
-+/-v      : Enable/disable verbose VirtualGL messages [default = disabled]
-
-+xcb/-xcb : Enable/disable XCB interposer [default = enabled]
-
-+wm/-wm   : Enable/disable window manager mode (for running compiz, etc.)
-
--64       : (Solaris only) Preload VirtualGL only into 64-bit apps
--32       : (Solaris only) Preload VirtualGL only into 32-bit apps
-

smoke_test/output_dir/wxwidgets/3.0.3

-